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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933189.1_cds_XP_016479570.1_71096
CDS Infomation

[gene=LOC107800842] [db_xref=GeneID:107800842] [protein=phosphoinositide phosphatase SAC2-like] [protein_id=XP_016479570.1] [location=join(19160..19255,20532..20736,20820..20985,21535..21757,22032..22108,22444..22631,22707..22804,22927..23060,23173..23301,23827..24166,24522..24643,24746..24859,25740..25931,26557..26694,26782..26863)] [gbkey=CDS]
Sequence

ATGGGGACAGATGACAAGCAACGGCGTTTAATCAATTCACATGAAAACAGCAGAGGCTTT
TATCTGCAAAAGTTCCGGCTTTATGAGACTCGCTCGAACTTCTACATGGTTGGATGGGAT
AAGACCAGAACTTTTTGGAAAGTATTAAAGATTGACAGATTAGAACCTTCGGAACTAATC
ATTCATGAAGACCCTACGTCATATTCAGAAATTGAATGCTTAGACCTCCTAAAAAGAATA
CATGAAGGAAACACGTCTACTGGAGGGCTTAAATTCGTTTCTCGCTGCTACGGAATTATT
GGTTTTATAAAGTTTTTGGGACCTTATTACTTCCTGGTTATCACGGAAAGAAGGAAGATT
GGAAAGATATGTGGTCATGCTGTTTATGCTATCACTAAGAGCGAGATGTTCCCAATTCCG
CACTCTACTGTGCTTTCCAATATGGCTTATTCTAAGGATGAGAACAGATATCAAAAGCTC
CTGCACATGGTGGACCTCACAAAGGACTTCTTTTTCAGCTACTCCTATCCTATTATGATT
AGTTTTCAAAAGAATCTGAGCAACTCAGAGACAGGACTCACCCTTTATGAGACAATGTTT
GTATGGAATGAATTCTTAACTCGCGGAATCCACAATCAGCTCCAAAATACTCTCTGGACA
GTTGCGTTAGTCTATGGGTTCTTTAAACAGGTTACACTTACTATTTCTGCACAGGACTTC
ATCTTAACCCTAATTGCTAGACGTTCTCGTCATTATGCTGGTACCAGATATTTAAAAAGA
GGAGTAAATGAGAAGGGTCATGTAGCAAATGACGTCGAGACGGAACAGATTGTGTTCGAA
AATGTACGTGAAGGGTCCCCTGTTGGAGTAAGCGCTGTTGTACAGAACCGTGGTTCAATA
CCTCTTTTCTGGTCTCAGGAAACGTCACGTTTGAATTTAAAACCTGACATCATATTGTCT
AGGAAGGACCTCAAGTTTGAAGCCACCAAACTTCACTTTGAAGATCTTGTTCAAAGATAT
GGAAATCCAGTTATTATATTAAATTTAATTAAGACTCGTGAGAAGAGGCCCAGAGAAACG
ATTCTTCGTGCAGAATTCGCTAATGCTATTGACTTCATAAATAAAGATCTTCCTGAGGAC
AACCAGTTGAGATTTCTTCACTGGGATCTAAACAAACACCCAAGAATCAAAGCTACAAAG
GCCTTGATACGTCTAGGTGAGGTGGCCGTTAATGCTTTGGAGTTAACAGGCCTTTTCCAT
TGTCAGCTAATCCCTACATCAAGAAGTGGGGAATTGCTAAAGCTGTCATCCATCGGCTGC
GACAGTAGTGGAGACCATGTTGAAAAGGACCTCTATGAAATGGATGTTGAAGTGGACAAT
GGGAGTGATGATCTGCGTGGAGCTTACTATGTCAAACTTTCAACAGTCCAAAAGGGAGTC
TTAAGAACGAATTGTATAGACTGTTTGGATCGCACAAATGTTGGCCAGTATGCGTATGGG
CTGGTCGCACTGACCCATCAGCTGCATGCCTTAGGCTTTATAGATGTGGAGAACATTGAT
TCGCATTCTCCTATAGCACATGACCTAATGAGGATCTACGAAGAAATGGGAGACACTCTT
GCACTACAATATGGTGGCTCTGCTGCACATAACAAGATTTTTTCAGAAATACGAGGCCAA
TGGAAAGCAACAACGAGGTCTCAAGAGTTCTTCCGATCGCTTCAGCGCTACTACAGCAAT
GCCTACATGGACCCTGAGAAACAAGATGCCATTAATGTGTTCTTGGGCCATTTCCAGCCA
CAAGAGGGAAAGCCATCTCTGTGGGAACTGAATCCAGAACAGCACTATGATGTTAGGATG
CACGGATCAACTCTAACCGCAGAAAGTTCTAGGTCATTTATTAAAAGGTCGCTATCAGAA
GGAAACATAAGCTGTGGAAGCAGCTCTCATGGTAAAGACACAGACATAGATCAGACTGAA
GACGCTCACCAGCCTTTGACTGTCTGTGGCAAAGGTGGTTGTAAGGGTATTTCAGAGTCC
ACACCAGAAATATCTACATGTGACACTGATATTTCGTTTACCAGGTACACCCCCTCAATG
TATGGTGGACAGTTTTTCCATGATATGCAGTTAGAGCAGTGTCTCGGAAGTGGCAGCGTT
AAATTTCATGAGTGTGCNCTTATTCCTTATCCCAAAAACAAAGAGGTTCAGTTCTCTTGC
TGGCTTGATAACTTAGCGACTTCAGCTATTAATGACAGAGTGGTGCAAAAGCAGAACAGT
GCTTTTGGCCCAGTTCATTTTTAG

Peptide Sequence

PEP ID

XP_016479570.1
PEP Infomation

PREDICTED: phosphoinositide phosphatase SAC2-like [Nicotiana tabacum]
Sequence

MGTDDKQRRLINSHENSRGFYLQKFRLYETRSNFYMVGWDKTRTFWKVLKIDRLEPSELI
IHEDPTSYSEIECLDLLKRIHEGNTSTGGLKFVSRCYGIIGFIKFLGPYYFLVITERRKI
GKICGHAVYAITKSEMFPIPHSTVLSNMAYSKDENRYQKLLHMVDLTKDFFFSYSYPIMI
SFQKNLSNSETGLTLYETMFVWNEFLTRGIHNQLQNTLWTVALVYGFFKQVTLTISAQDF
ILTLIARRSRHYAGTRYLKRGVNEKGHVANDVETEQIVFENVREGSPVGVSAVVQNRGSI
PLFWSQETSRLNLKPDIILSRKDLKFEATKLHFEDLVQRYGNPVIILNLIKTREKRPRET
ILRAEFANAIDFINKDLPEDNQLRFLHWDLNKHPRIKATKALIRLGEVAVNALELTGLFH
CQLIPTSRSGELLKLSSIGCDSSGDHVEKDLYEMDVEVDNGSDDLRGAYYVKLSTVQKGV
LRTNCIDCLDRTNVGQYAYGLVALTHQLHALGFIDVENIDSHSPIAHDLMRIYEEMGDTL
ALQYGGSAAHNKIFSEIRGQWKATTRSQEFFRSLQRYYSNAYMDPEKQDAINVFLGHFQP
QEGKPSLWELNPEQHYDVRMHGSTLTAESSRSFIKRSLSEGNISCGSSSHGKDTDIDQTE
DAHQPLTVCGKGGCKGISESTPEISTCDTDISFTRYTPSMYGGQFFHDMQLEQCLGSGSV
KFHECALIPYPKNKEVQFSCWLDNLATSAINDRVVQKQNSAFGPVHF

Transcript Sequence

Gene sequence data has not been registered.